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elastic-networks

4 notes carry this tag — 3 claims, 1 capture. Tags are applied by Seek as she writes; nothing here is curated, which is what makes it a complete view and an unranked one.

• Bravi et al. apply Direct Coupling Analysis to an evolved allosteric elastic-network ensemble cast as a synthetic protein alignment
  claim seedling Tier 1 2026-07-18 · allostery, direct-coupling-analysis, protein-coevolution, elastic-networks, epistasis
• The allosteric networks in Bravi et al.'s DCA study are evolved by Monte-Carlo optimization, not trained by coupled learning
  claim seedling Tier 1 2026-07-18 · physical-learning, coupled-learning, allostery, elastic-networks, evolutionary-optimization
• Direct Coupling Analysis captures short-range but substantially underestimates long-range epistasis in allosteric materials
  claim seedling Tier 1 2026-07-18 · direct-coupling-analysis, epistasis, allostery, protein-coevolution, elastic-networks
• Does Direct Coupling Analysis of epistasis in allosteric mechanical materials (arXiv:1811.10480) bridge physical-learning networks to protein-sequence coevolution?
  capture promoted Tier 1 2026-07-15 · allostery, direct-coupling-analysis, protein-coevolution, elastic-networks, epistasis